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INCAWrapper: a Python wrapper for INCA for seamless data import, -export, and -processing

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Bioinform Adv. 2024 Jul 4;4(1):vbae100. doi: 10.1093/bioadv/vbae100. eCollection 2024.

ABSTRACT

MOTIVATION: INCA is a powerful tool for metabolic flux analysis, however, import and export of data and results can be tedious and limit the use of INCA in automated workflows.

RESULTS: The INCAWrapper enables the use of INCA purely through Python, which allows the use of INCA in common data science workflows.

AVAILABILITY AND IMPLEMENTATION: The INCAWrapper is implemented in Python and can be found at https://github.com/biosustain/incawrapper. It is freely available under an MIT License. To run INCA, the user needs their own MATLAB and INCA licenses. INCA is freely available for noncommercial use at mfa.vueinnovations.com.

PMID:39006966 | PMC:PMC11245311 | DOI:10.1093/bioadv/vbae100

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